Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | SAMN05421847_1711 | Not Available | Positive | 1781426 - 1782370 | 34547.0 |
| lsu ribosomal protein l25p | SAMN05421847_1712 | Not Available | Positive | 1782514 - 1783167 | 23656.2 |
| protein of unknown function | SAMN05421847_1714 | Not Available | Positive | 1783462 - 1784010 | 20226.0 |
| trna(adenine34) deaminase | SAMN05421847_1715 | Not Available | Positive | 1784086 - 1784517 | 15942.3 |
| type iii restriction enzyme, res subunit | SAMN05421847_1716 | Not Available | Positive | 1784520 - 1787171 | 102990.0 |
| type iii pantothenate kinase | SAMN05421847_1717 | Not Available | Negative | 1787181 - 1787939 | 27960.8 |
| hypothetical protein | SAMN05421847_1718 | Not Available | Negative | 1788008 - 1789852 | 70924.6 |
| hypothetical protein | SAMN05421847_1719 | Not Available | Negative | 1789963 - 1791645 | 63804.7 |
| glutamine synthetase | SAMN05421847_1720 | Not Available | Positive | 1791867 - 1794062 | 82379.5 |
| lipoprotein spr | SAMN05421847_1721 | Not Available | Positive | 1794389 - 1795081 | 25133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
