Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcystin-dependent protein | SAMN05421847_1690 | Not Available | Positive | 1755787 - 1756374 | 20452.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05421847_1691 | Not Available | Positive | 1756377 - 1757066 | 25052.8 |
| hypothetical protein | SAMN05421847_1692 | Not Available | Positive | 1757289 - 1757996 | 27711.1 |
| hypothetical protein | SAMN05421847_1693 | Not Available | Positive | 1758081 - 1758296 | 8198.83 |
| gtp-binding protein lepa | SAMN05421847_1694 | Not Available | Positive | 1758366 - 1760162 | 67058.1 |
| cupin-like domain-containing protein | SAMN05421847_1695 | Not Available | Negative | 1760307 - 1761188 | 34502.8 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421847_1696 | Not Available | Positive | 1761376 - 1764057 | 101094.0 |
| glpgli family protein | SAMN05421847_1697 | Not Available | Positive | 1764174 - 1765064 | 34336.6 |
| ferrous iron transport protein a | SAMN05421847_1698 | Not Available | Positive | 1765194 - 1765448 | 9690.92 |
| ferrous iron transport protein b | SAMN05421847_1699 | Not Available | Positive | 1765538 - 1767568 | 76383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
