Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1649 | Not Available | Negative | 1714162 - 1714818 | 24362.1 |
| outer membrane cobalamin receptor protein | SAMN05421847_1650 | Not Available | Negative | 1715008 - 1717215 | 82024.5 |
| superoxide dismutase, cu-zn family | SAMN05421847_1651 | Not Available | Positive | 1717427 - 1717936 | 17985.3 |
| mechanosensitive ion channel | SAMN05421847_1652 | Not Available | Negative | 1717977 - 1718861 | 33203.9 |
| carboxyl-terminal processing protease | SAMN05421847_1653 | Not Available | Negative | 1718951 - 1721071 | 80811.8 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05421847_1654 | Not Available | Positive | 1721142 - 1721981 | 30928.1 |
| quaternary ammonium compound-resistance protein suge | SAMN05421847_1655 | Not Available | Positive | 1722005 - 1722334 | 11937.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421847_1656 | Not Available | Positive | 1722422 - 1723498 | 40214.1 |
| gmp reductase | SAMN05421847_1657 | Not Available | Positive | 1723550 - 1724590 | 37765.5 |
| hypothetical protein | SAMN05421847_1658 | Not Available | Positive | 1724607 - 1725266 | 25040.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
