Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0151 | Not Available | Positive | 145332 - 146606 | 48837.2 |
| hypothetical protein | SAMN05421847_0152 | Not Available | Positive | 146609 - 147526 | 35065.1 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN05421847_0153 | Not Available | Positive | 147649 - 148152 | 19555.6 |
| hypothetical protein | SAMN05421847_0154 | Not Available | Positive | 148232 - 148579 | 13542.9 |
| hypothetical protein | SAMN05421847_0155 | Not Available | Positive | 148591 - 148980 | 14733.5 |
| hypothetical protein | SAMN05421847_0156 | Not Available | Positive | 149047 - 149424 | 14975.0 |
| dihydrolipoamide dehydrogenase | SAMN05421847_0157 | Not Available | Positive | 149463 - 150851 | 49550.9 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05421847_0158 | Not Available | Positive | 151234 - 151935 | 24911.3 |
| nte family protein | SAMN05421847_0159 | Not Available | Positive | 151940 - 152713 | 28672.2 |
| diacylglycerol kinase (atp) | SAMN05421847_0160 | Not Available | Negative | 152686 - 153054 | 13732.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
