Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1639 | Not Available | Positive | 1704448 - 1706163 | 66613.3 |
| spore maturation protein spma | SAMN05421847_1640 | Not Available | Positive | 1706222 - 1707625 | 50465.9 |
| hypothetical protein | SAMN05421847_1641 | Not Available | Positive | 1707658 - 1708044 | 15168.5 |
| muts domain v | SAMN05421847_1642 | Not Available | Positive | 1708051 - 1709838 | 68167.7 |
| two component transcriptional regulator, lyttr family | SAMN05421847_1643 | Not Available | Negative | 1709840 - 1710583 | 28972.0 |
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN05421847_1644 | Not Available | Negative | 1710728 - 1711288 | 21488.0 |
| 2tm domain-containing protein | SAMN05421847_1645 | Not Available | Negative | 1711290 - 1711589 | 11779.5 |
| 2tm domain-containing protein | SAMN05421847_1646 | Not Available | Negative | 1711576 - 1711875 | 11961.5 |
| histidine kinase | SAMN05421847_1647 | Not Available | Negative | 1711880 - 1713208 | 51299.1 |
| 2tm domain-containing protein | SAMN05421847_1648 | Not Available | Negative | 1713559 - 1713879 | 12250.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
