Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1696541 - 1696625 | Not Available |
| protein of unknown function | SAMN05421847_1630 | Not Available | Positive | 1696791 - 1697168 | 14101.5 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN05421847_1631 | Not Available | Positive | 1697184 - 1697879 | 26629.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05421847_1632 | Not Available | Positive | 1697876 - 1698775 | 33336.6 |
| cbs domain-containing protein | SAMN05421847_1633 | Not Available | Positive | 1699006 - 1699659 | 24984.2 |
| nad+ kinase | SAMN05421847_1634 | Not Available | Positive | 1699746 - 1700612 | 32594.4 |
| fructose-bisphosphate aldolase | SAMN05421847_1635 | Not Available | Positive | 1700680 - 1701747 | 39120.3 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN05421847_1636 | Not Available | Positive | 1701838 - 1702689 | 31892.4 |
| hypothetical protein | SAMN05421847_1637 | Not Available | Positive | 1702867 - 1703388 | 20302.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421847_1638 | Not Available | Positive | 1703484 - 1704296 | 30918.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
