Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | SAMN05421847_1618 | Not Available | Negative | 1688398 - 1689969 | 58460.4 |
| nitroreductase | SAMN05421847_1619 | Not Available | Negative | 1690179 - 1690808 | 24041.1 |
| ribonuclease hi | SAMN05421847_1620 | Not Available | Negative | 1690882 - 1691358 | 17961.5 |
| replicative dna helicase | SAMN05421847_1621 | Not Available | Negative | 1691532 - 1693115 | 58525.0 |
| predicted arabinose efflux permease, mfs family | SAMN05421847_1623 | Not Available | Negative | 1693799 - 1695028 | 45167.1 |
| histone h1-like protein hc1 | SAMN05421847_1624 | Not Available | Negative | 1695108 - 1695284 | 6477.72 |
| hypothetical protein | SAMN05421847_1625 | Not Available | Positive | 1695737 - 1695901 | 6407.33 |
| hypothetical protein | SAMN05421847_1626 | Not Available | Positive | 1695898 - 1696011 | 4593.5 |
| Trna-leu | Not Available | Not Available | Positive | 1696356 - 1696439 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1696445 - 1696520 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
