Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1544 | Not Available | Negative | 1614289 - 1615686 | 50086.7 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421847_1545 | Not Available | Negative | 1615713 - 1618625 | 109521.0 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421847_1546 | Not Available | Positive | 1618760 - 1619956 | 45209.8 |
| hypothetical protein | SAMN05421847_1547 | Not Available | Positive | 1620046 - 1620459 | 16211.3 |
| peptide-methionine (r)-s-oxide reductase | SAMN05421847_1548 | Not Available | Negative | 1620543 - 1621079 | 20062.7 |
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN05421847_1549 | Not Available | Positive | 1621150 - 1622394 | 47570.6 |
| hypothetical protein | SAMN05421847_1550 | Not Available | Negative | 1622391 - 1623233 | 29673.7 |
| outer membrane transport energization protein exbd | SAMN05421847_1551 | Not Available | Negative | 1623234 - 1623629 | 14672.6 |
| outer membrane transport energization protein exbb | SAMN05421847_1552 | Not Available | Negative | 1623630 - 1624310 | 24710.4 |
| hypothetical protein | SAMN05421847_1553 | Not Available | Negative | 1624397 - 1624846 | 17501.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
