Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN05421847_0141 | Not Available | Positive | 139011 - 140714 | 65952.2 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421847_0142 | Not Available | Positive | 140716 - 141387 | 25649.3 |
| hypothetical protein | SAMN05421847_0143 | Not Available | Positive | 141549 - 141698 | 5270.07 |
| hypothetical protein | SAMN05421847_0144 | Not Available | Positive | 141686 - 141994 | 12211.6 |
| hypothetical protein | SAMN05421847_0145 | Not Available | Positive | 142005 - 142337 | 12152.3 |
| hypothetical protein | SAMN05421847_0146 | Not Available | Positive | 142347 - 143411 | 41383.3 |
| tm2 domain-containing membrane protein yozv | SAMN05421847_0147 | Not Available | Positive | 143411 - 144019 | 23426.5 |
| sh3 domain-containing protein | SAMN05421847_0148 | Not Available | Positive | 144022 - 144555 | 19266.2 |
| hypothetical protein | SAMN05421847_0149 | Not Available | Positive | 144557 - 144925 | 14288.9 |
| hypothetical protein | SAMN05421847_0150 | Not Available | Positive | 144929 - 145330 | 15782.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
