Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol biosynthesis cysteine-adding enzyme bshc | SAMN05421847_1533 | Not Available | Negative | 1597652 - 1599238 | 61772.5 |
| putative porin | SAMN05421847_1534 | Not Available | Negative | 1599475 - 1601406 | 74288.4 |
| starch-binding associating with outer membrane | SAMN05421847_1535 | Not Available | Negative | 1601542 - 1602972 | 53703.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421847_1536 | Not Available | Negative | 1602996 - 1605908 | 105624.0 |
| translation initiation factor if-2 | SAMN05421847_1537 | Not Available | Negative | 1606099 - 1608903 | 102652.0 |
| nusa antitermination factor | SAMN05421847_1538 | Not Available | Negative | 1608987 - 1610222 | 47118.1 |
| ribosome maturation factor rimp | SAMN05421847_1539 | Not Available | Negative | 1610245 - 1610712 | 17722.1 |
| dtdp-glucose 4,6-dehydratase | SAMN05421847_1540 | Not Available | Positive | 1610953 - 1612038 | 41185.3 |
| hypothetical protein | SAMN05421847_1542 | Not Available | Positive | 1612542 - 1613006 | 18146.8 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421847_1543 | Not Available | Positive | 1613038 - 1613895 | 31268.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
