Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1503 | Not Available | Negative | 1561473 - 1562207 | 26983.2 |
| hypothetical protein | SAMN05421847_1504 | Not Available | Negative | 1562250 - 1562978 | 28410.5 |
| para-aminobenzoate synthetase component 1 | SAMN05421847_1505 | Not Available | Positive | 1563184 - 1564125 | 35924.2 |
| 4-amino-4-deoxychorismate lyase | SAMN05421847_1506 | Not Available | Positive | 1564109 - 1564729 | 24330.9 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN05421847_1507 | Not Available | Negative | 1564865 - 1566529 | 64020.3 |
| hypothetical protein | SAMN05421847_1508 | Not Available | Negative | 1566770 - 1566961 | 7452.9 |
| prolyl oligopeptidase | SAMN05421847_1509 | Not Available | Positive | 1567092 - 1569203 | 78872.2 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05421847_1510 | Not Available | Positive | 1569534 - 1571963 | 89466.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421847_1511 | Not Available | Negative | 1572133 - 1574661 | 94533.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421847_1512 | Not Available | Negative | 1574691 - 1577126 | 90757.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
