Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05421847_1473 | Not Available | Positive | 1518068 - 1519315 | 44416.8 |
| rnase iii | SAMN05421847_1474 | Not Available | Positive | 1519325 - 1520089 | 29429.8 |
| hypothetical protein | SAMN05421847_1475 | Not Available | Positive | 1520064 - 1520537 | 18942.6 |
| pyruvate kinase | SAMN05421847_1476 | Not Available | Positive | 1520530 - 1521975 | 53714.0 |
| formiminoglutamase | SAMN05421847_1477 | Not Available | Positive | 1522400 - 1523317 | 34423.1 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05421847_1478 | Not Available | Positive | 1523418 - 1524695 | 47243.9 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paaa | SAMN05421847_1479 | Not Available | Negative | 1525270 - 1526214 | 36185.1 |
| hypothetical protein | SAMN05421847_1480 | Not Available | Negative | 1526465 - 1526758 | 11780.0 |
| hypothetical protein | SAMN05421847_1481 | Not Available | Negative | 1526742 - 1526999 | 10078.9 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05421847_1482 | Not Available | Negative | 1527251 - 1528339 | 41352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
