Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421847_1461 | Not Available | Negative | 1509623 - 1509778 | 5563.95 |
| large subunit ribosomal protein l33 | SAMN05421847_1462 | Not Available | Negative | 1509798 - 1509980 | 7032.72 |
| lsu ribosomal protein l28p | SAMN05421847_1463 | Not Available | Negative | 1509987 - 1510229 | 8951.14 |
| dnaj domain-containing protein | SAMN05421847_1465 | Not Available | Positive | 1510692 - 1511138 | 17344.9 |
| hypothetical protein | SAMN05421847_1466 | Not Available | Negative | 1511288 - 1512118 | 32511.6 |
| hypothetical protein | SAMN05421847_1468 | Not Available | Positive | 1513008 - 1513628 | 24054.8 |
| hypothetical protein | SAMN05421847_1469 | Not Available | Positive | 1513705 - 1516536 | 98509.8 |
| vanz like family protein | SAMN05421847_1470 | Not Available | Negative | 1516810 - 1517136 | 12734.2 |
| glycine cleavage system h protein | SAMN05421847_1471 | Not Available | Negative | 1517165 - 1517542 | 13785.0 |
| acyl carrier protein | SAMN05421847_1472 | Not Available | Positive | 1517807 - 1518046 | 8773.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
