Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1697 family | SAMN05421847_0130 | Not Available | Positive | 127536 - 128075 | 20661.2 |
| arac-type dna-binding protein | SAMN05421847_0131 | Not Available | Negative | 128112 - 129683 | 62333.6 |
| hypothetical protein | SAMN05421847_0132 | Not Available | Positive | 130068 - 130259 | 6925.94 |
| hypothetical protein | SAMN05421847_0133 | Not Available | Positive | 130392 - 130583 | 6911.91 |
| hypothetical protein | SAMN05421847_0134 | Not Available | Negative | 131296 - 131607 | 11630.6 |
| pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (e1) component | SAMN05421847_0135 | Not Available | Positive | 131738 - 134170 | 91315.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421847_0137 | Not Available | Positive | 134477 - 134998 | 20377.6 |
| ca-activated chloride channel family protein | SAMN05421847_0138 | Not Available | Positive | 135011 - 137419 | 89441.2 |
| hypothetical protein | SAMN05421847_0139 | Not Available | Negative | 137484 - 138413 | 35819.8 |
| hypothetical protein | SAMN05421847_0140 | Not Available | Positive | 138795 - 138962 | 5857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
