Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1420 | Not Available | Positive | 1458776 - 1459882 | 43115.1 |
| hypothetical protein | SAMN05421847_1421 | Not Available | Positive | 1459879 - 1460622 | 28404.9 |
| type i restriction-modification system, dna methylase subunit | SAMN05421847_1422 | Not Available | Positive | 1460604 - 1462463 | 73080.1 |
| sir2-like domain-containing protein | SAMN05421847_1424 | Not Available | Negative | 1463559 - 1465478 | 74047.6 |
| n-6 dna methylase | SAMN05421847_1425 | Not Available | Negative | 1465480 - 1468521 | 118374.0 |
| hypothetical protein | SAMN05421847_1426 | Not Available | Positive | 1468657 - 1469886 | 47646.5 |
| hypothetical protein | SAMN05421847_1427 | Not Available | Positive | 1471040 - 1471834 | 29096.3 |
| hypothetical protein | SAMN05421847_1428 | Not Available | Positive | 1471892 - 1472242 | 13815.2 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN05421847_1429 | Not Available | Positive | 1472239 - 1473699 | 56920.7 |
| chromosome partitioning protein | SAMN05421847_1430 | Not Available | Positive | 1473700 - 1474350 | 24976.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
