Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1410 | Not Available | Positive | 1450712 - 1450930 | 8297.23 |
| protein of unknown function | SAMN05421847_1411 | Not Available | Positive | 1450932 - 1451219 | 10641.9 |
| protein of unknown function | SAMN05421847_1412 | Not Available | Positive | 1451216 - 1451476 | 9593.9 |
| hypothetical protein | SAMN05421847_1413 | Not Available | Positive | 1451463 - 1452065 | 23581.4 |
| hypothetical protein | SAMN05421847_1414 | Not Available | Positive | 1452185 - 1452403 | 8143.12 |
| hypothetical protein | SAMN05421847_1415 | Not Available | Positive | 1452423 - 1453520 | 42780.8 |
| toprim-like | SAMN05421847_1416 | Not Available | Positive | 1453928 - 1454776 | 33239.9 |
| transcriptional regulator, predicted component of viral defense system | SAMN05421847_1417 | Not Available | Positive | 1454874 - 1455683 | 31185.2 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05421847_1418 | Not Available | Positive | 1455680 - 1456474 | 31064.9 |
| histidine kinase | SAMN05421847_1419 | Not Available | Positive | 1456486 - 1458789 | 88127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
