Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1399 | Not Available | Negative | 1436880 - 1437347 | 17379.8 |
| transcriptional regulator, arsr family | SAMN05421847_1400 | Not Available | Negative | 1437396 - 1437728 | 12235.9 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05421847_1402 | Not Available | Positive | 1438972 - 1443369 | 161658.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05421847_1403 | Not Available | Positive | 1443393 - 1444589 | 43626.2 |
| zinc transporter, zip family | SAMN05421847_1404 | Not Available | Positive | 1444675 - 1445397 | 25492.3 |
| cd2+/zn2+-exporting atpase | SAMN05421847_1405 | Not Available | Positive | 1445540 - 1447498 | 70927.5 |
| phosphatidylethanolamine/phosphatidyl-n- methylethanolamine n-methyltransferase | SAMN05421847_1406 | Not Available | Positive | 1447555 - 1448217 | 24977.1 |
| site-specific recombinase xerd | SAMN05421847_1407 | Not Available | Negative | 1448241 - 1449509 | 50088.4 |
| hypothetical protein | SAMN05421847_1408 | Not Available | Negative | 1449509 - 1450156 | 24828.1 |
| hypothetical protein | SAMN05421847_1409 | Not Available | Negative | 1450159 - 1450593 | 15859.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
