Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN05421847_1389 | Not Available | Positive | 1426331 - 1427551 | 46577.5 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN05421847_1390 | Not Available | Positive | 1427554 - 1429308 | 64803.9 |
| type ii restriction enzyme | SAMN05421847_1391 | Not Available | Positive | 1429407 - 1430654 | 47862.6 |
| hypothetical protein | SAMN05421847_1392 | Not Available | Positive | 1430645 - 1430908 | 10030.8 |
| hypothetical protein | SAMN05421847_1393 | Not Available | Positive | 1431024 - 1431401 | 14294.6 |
| protein of unknown function | SAMN05421847_1394 | Not Available | Positive | 1431502 - 1431972 | 17369.9 |
| multicopper oxidase | SAMN05421847_1395 | Not Available | Positive | 1431975 - 1434506 | 97016.7 |
| hypothetical protein | SAMN05421847_1396 | Not Available | Positive | 1434701 - 1434949 | 9737.9 |
| arsenite transporter, acr3 family | SAMN05421847_1397 | Not Available | Negative | 1435183 - 1436229 | 38252.4 |
| arsenate reductase | SAMN05421847_1398 | Not Available | Negative | 1436233 - 1436865 | 23935.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
