Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haem-binding domain-containing protein | SAMN05421847_1379 | Not Available | Positive | 1415251 - 1415703 | 17331.3 |
| protein of unknown function | SAMN05421847_1380 | Not Available | Positive | 1415723 - 1416322 | 22115.0 |
| hypothetical protein | SAMN05421847_1381 | Not Available | Positive | 1416470 - 1416607 | 5007.24 |
| ion channel | SAMN05421847_1382 | Not Available | Positive | 1416699 - 1417244 | 20494.6 |
| protein of unknown function | SAMN05421847_1383 | Not Available | Positive | 1417331 - 1418080 | 28130.2 |
| cu2+-exporting atpase | SAMN05421847_1384 | Not Available | Positive | 1418136 - 1420640 | 90651.7 |
| protein of unknown function | SAMN05421847_1385 | Not Available | Positive | 1420833 - 1421327 | 18724.4 |
| hypothetical protein | SAMN05421847_1386 | Not Available | Positive | 1421493 - 1421897 | 14976.9 |
| conserved hypothetical protein | SAMN05421847_1387 | Not Available | Positive | 1421976 - 1422428 | 17210.6 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN05421847_1388 | Not Available | Positive | 1422505 - 1426338 | 142127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
