Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05421847_1369 | Not Available | Positive | 1407013 - 1407570 | 21287.9 |
| putative membrane protein | SAMN05421847_1370 | Not Available | Positive | 1408120 - 1408338 | 8569.34 |
| hypothetical protein | SAMN05421847_1371 | Not Available | Positive | 1408355 - 1408654 | 10693.4 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05421847_1372 | Not Available | Positive | 1408758 - 1410107 | 47486.5 |
| cu+-exporting atpase | SAMN05421847_1373 | Not Available | Positive | 1410213 - 1410470 | 8667.13 |
| hypothetical protein | SAMN05421847_1374 | Not Available | Positive | 1410606 - 1410695 | 3249.16 |
| hypothetical protein | SAMN05421847_1375 | Not Available | Positive | 1411006 - 1411236 | 8635.54 |
| protein of unknown function | SAMN05421847_1376 | Not Available | Positive | 1411329 - 1411796 | 17040.4 |
| hypothetical protein | SAMN05421847_1377 | Not Available | Positive | 1412042 - 1414639 | 98476.2 |
| protein of unknown function | SAMN05421847_1378 | Not Available | Positive | 1414677 - 1415249 | 20654.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
