Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1338 | Not Available | Positive | 1380824 - 1381105 | 11294.7 |
| hypothetical protein | SAMN05421847_1339 | Not Available | Positive | 1381275 - 1381499 | 8378.07 |
| plasmid stabilization system protein pare | SAMN05421847_1340 | Not Available | Positive | 1381487 - 1381786 | 11935.2 |
| bacillithiol biosynthesis deacetylase bshb1 | SAMN05421847_1341 | Not Available | Positive | 1381857 - 1382576 | 26842.0 |
| Trna-his | Not Available | Not Available | Positive | 1382615 - 1382690 | Not Available |
| dsre/dsrf-like family protein | SAMN05421847_1343 | Not Available | Positive | 1382855 - 1383979 | 42735.1 |
| thiosulfate dehydrogenase | SAMN05421847_1344 | Not Available | Negative | 1383976 - 1384887 | 34250.7 |
| protein of unknown function | SAMN05421847_1346 | Not Available | Negative | 1385092 - 1385427 | 13105.1 |
| atp-binding cassette, subfamily b | SAMN05421847_1347 | Not Available | Negative | 1385529 - 1387190 | 62829.7 |
| nusb antitermination factor | SAMN05421847_1348 | Not Available | Positive | 1387250 - 1388158 | 35931.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
