Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system permease protein | SAMN05421847_0120 | Not Available | Positive | 111367 - 112683 | 49034.4 |
| hypothetical protein | SAMN05421847_0121 | Not Available | Negative | 112954 - 113778 | 31228.0 |
| gliding motility-associated lipoprotein gldj | SAMN05421847_0122 | Not Available | Negative | 113994 - 115556 | 59074.8 |
| peptidase family c25 | SAMN05421847_0123 | Not Available | Positive | 115760 - 119632 | 144303.0 |
| hypothetical protein | SAMN05421847_0124 | Not Available | Positive | 119655 - 120818 | 41776.9 |
| uncharacterized membrane protein yccc | SAMN05421847_0125 | Not Available | Positive | 120913 - 123165 | 86533.0 |
| phosphopantetheinyl transferase | SAMN05421847_0126 | Not Available | Negative | 123315 - 123926 | 24272.0 |
| hypothetical protein | SAMN05421847_0127 | Not Available | Positive | 124071 - 124883 | 31339.6 |
| hypothetical protein | SAMN05421847_0128 | Not Available | Positive | 124977 - 125777 | 30472.5 |
| adenosylhomocysteinase | SAMN05421847_0129 | Not Available | Positive | 125949 - 127262 | 47923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
