Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator padr-like family protein | SAMN05421847_1253 | Not Available | Positive | 1295400 - 1295726 | 12659.5 |
| hypothetical protein | SAMN05421847_1254 | Not Available | Positive | 1295723 - 1296445 | 28105.5 |
| hypothetical protein | SAMN05421847_1255 | Not Available | Positive | 1296563 - 1297291 | 28693.3 |
| excinuclease abc subunit b | SAMN05421847_1256 | Not Available | Negative | 1297400 - 1299391 | 75360.5 |
| blar1 peptidase m56 | SAMN05421847_1257 | Not Available | Negative | 1299864 - 1301279 | 54388.9 |
| predicted transcriptional regulator | SAMN05421847_1258 | Not Available | Negative | 1301282 - 1301653 | 14369.5 |
| hypothetical protein | SAMN05421847_1259 | Not Available | Negative | 1301650 - 1302192 | 21289.8 |
| hypothetical protein | SAMN05421847_1260 | Not Available | Positive | 1302307 - 1302825 | 19313.2 |
| tyrosine phenol-lyase | SAMN05421847_1261 | Not Available | Negative | 1302832 - 1304208 | 52043.5 |
| uncharacterized membrane protein | SAMN05421847_1263 | Not Available | Negative | 1304428 - 1305039 | 22022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
