Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsw | SAMN05421847_1189 | Not Available | Negative | 1223614 - 1224849 | 45139.7 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | SAMN05421847_1190 | Not Available | Negative | 1224868 - 1226217 | 50572.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SAMN05421847_1191 | Not Available | Negative | 1226222 - 1227463 | 46499.6 |
| hypothetical protein | SAMN05421847_1192 | Not Available | Negative | 1227495 - 1227851 | 14093.5 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN05421847_1193 | Not Available | Negative | 1227877 - 1229337 | 54115.6 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN05421847_1194 | Not Available | Negative | 1229430 - 1231415 | 74563.0 |
| hypothetical protein | SAMN05421847_1195 | Not Available | Negative | 1231399 - 1231767 | 14341.8 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN05421847_1196 | Not Available | Negative | 1231773 - 1232666 | 34437.2 |
| mraz protein | SAMN05421847_1197 | Not Available | Negative | 1232656 - 1233126 | 17848.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421847_1198 | Not Available | Positive | 1233384 - 1234142 | 28719.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
