Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bacilliredoxin, yphp/yqiw family | SAMN05421847_1178 | Not Available | Negative | 1210590 - 1211000 | 14430.2 |
| sodium/proton antiporter, cpa1 family | SAMN05421847_1179 | Not Available | Negative | 1211096 - 1212352 | 45709.1 |
| hypothetical protein | SAMN05421847_1181 | Not Available | Negative | 1214899 - 1215345 | 16170.7 |
| cell division protein ftsz | SAMN05421847_1182 | Not Available | Negative | 1215457 - 1217298 | 67903.2 |
| cell division protein ftsa | SAMN05421847_1183 | Not Available | Negative | 1217391 - 1218746 | 49572.7 |
| cell division protein ftsq | SAMN05421847_1184 | Not Available | Negative | 1218779 - 1219624 | 31799.8 |
| udp-n-acetylmuramate--l-alanine ligase | SAMN05421847_1185 | Not Available | Negative | 1219668 - 1221032 | 51746.6 |
| hypothetical protein | SAMN05421847_1186 | Not Available | Negative | 1221041 - 1221508 | 18177.8 |
| hypothetical protein | SAMN05421847_1187 | Not Available | Negative | 1221539 - 1222192 | 25702.7 |
| udp-n-acetylglucosamine-n- acetylmuramylpentapeptide n-acetylglucosamine transferase | SAMN05421847_1188 | Not Available | Negative | 1222199 - 1223365 | 42611.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
