Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1158 | Not Available | Negative | 1188027 - 1188332 | 11705.8 |
| hypothetical protein | SAMN05421847_1159 | Not Available | Negative | 1188342 - 1189199 | 31562.1 |
| lipid a ethanolaminephosphotransferase | SAMN05421847_1160 | Not Available | Negative | 1189342 - 1190862 | 57742.5 |
| pap2 superfamily protein | SAMN05421847_1161 | Not Available | Negative | 1190849 - 1191676 | 31363.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05421847_1162 | Not Available | Negative | 1191777 - 1192292 | 18881.7 |
| putative negative regulator of rcsb-dependent stress response | SAMN05421847_1163 | Not Available | Negative | 1192296 - 1193009 | 26541.2 |
| hypothetical protein | SAMN05421847_1164 | Not Available | Negative | 1193328 - 1194488 | 41920.6 |
| hypothetical protein | SAMN05421847_1165 | Not Available | Negative | 1194603 - 1195934 | 51204.9 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421847_1166 | Not Available | Negative | 1195949 - 1196620 | 24057.5 |
| protein of unknown function | SAMN05421847_1167 | Not Available | Negative | 1196667 - 1197188 | 19510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
