Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_1136 | Not Available | Positive | 1168101 - 1168631 | 20271.0 |
| peptidyl-trna hydrolase | SAMN05421847_1137 | Not Available | Negative | 1168875 - 1169438 | 20988.5 |
| hypothetical protein | SAMN05421847_1138 | Not Available | Negative | 1169442 - 1170281 | 30339.9 |
| transcription-repair coupling factor | SAMN05421847_1139 | Not Available | Negative | 1170314 - 1173688 | 128636.0 |
| hypothetical protein | SAMN05421847_1140 | Not Available | Negative | 1173697 - 1174053 | 13903.1 |
| plasmid stabilization system protein pare | SAMN05421847_1141 | Not Available | Negative | 1174264 - 1174557 | 11441.8 |
| putative addiction module component | SAMN05421847_1142 | Not Available | Negative | 1174554 - 1174805 | 9973.62 |
| protein of unknown function | SAMN05421847_1143 | Not Available | Positive | 1174970 - 1175857 | 32828.1 |
| hypothetical protein | SAMN05421847_1144 | Not Available | Positive | 1175956 - 1176222 | 9393.56 |
| hypothetical protein | SAMN05421847_1145 | Not Available | Positive | 1176282 - 1176635 | 12955.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
