Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_1126 | Not Available | Positive | 1160090 - 1161253 | 45068.2 |
| serine o-acetyltransferase | SAMN05421847_1127 | Not Available | Positive | 1161280 - 1161834 | 20645.1 |
| carbonic anhydrase | SAMN05421847_1128 | Not Available | Positive | 1161926 - 1162594 | 25859.2 |
| hypothetical protein | SAMN05421847_1129 | Not Available | Positive | 1162785 - 1163078 | 11011.5 |
| sulfate permease, mfs superfamily | SAMN05421847_1130 | Not Available | Positive | 1163192 - 1164799 | 56972.7 |
| carbonic anhydrase | SAMN05421847_1131 | Not Available | Positive | 1164822 - 1165457 | 23556.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421847_1132 | Not Available | Positive | 1165578 - 1166150 | 22144.5 |
| hypothetical protein | SAMN05421847_1133 | Not Available | Positive | 1166522 - 1167007 | 17986.4 |
| hypothetical protein | SAMN05421847_1134 | Not Available | Positive | 1167004 - 1167684 | 23435.3 |
| hypothetical protein | SAMN05421847_1135 | Not Available | Positive | 1167647 - 1168099 | 17267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
