Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0100 | Not Available | Negative | 91275 - 91769 | 18392.1 |
| hypothetical protein | SAMN05421847_0101 | Not Available | Negative | 91775 - 92266 | 17957.0 |
| miniconductance mechanosensitive channel | SAMN05421847_0102 | Not Available | Positive | 92340 - 93599 | 48598.9 |
| pyridoxine 5-phosphate synthase | SAMN05421847_0103 | Not Available | Positive | 93602 - 94321 | 26879.9 |
| hypothetical protein | SAMN05421847_0104 | Not Available | Positive | 94342 - 94647 | 12115.8 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05421847_0105 | Not Available | Positive | 94602 - 95210 | 23422.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421847_0106 | Not Available | Positive | 95215 - 95994 | 29381.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421847_0107 | Not Available | Positive | 96057 - 97103 | 39264.2 |
| long-chain acyl-coa synthetase | SAMN05421847_0108 | Not Available | Positive | 97113 - 98870 | 66708.6 |
| diphosphomevalonate decarboxylase | SAMN05421847_0109 | Not Available | Positive | 99054 - 100115 | 39985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
