Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN05421847_1116 | Not Available | Negative | 1150776 - 1152209 | 56093.0 |
| acyl carrier protein | SAMN05421847_1117 | Not Available | Negative | 1152247 - 1152486 | 9114.69 |
| had-superfamily phosphatase, subfamily iiic/fkbh-like domain-containing protein | SAMN05421847_1118 | Not Available | Negative | 1152490 - 1154208 | 65979.9 |
| methyltransferase domain-containing protein | SAMN05421847_1119 | Not Available | Negative | 1154216 - 1154986 | 29128.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_1120 | Not Available | Positive | 1155101 - 1155937 | 32026.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_1121 | Not Available | Positive | 1155946 - 1157112 | 45199.5 |
| amino acid adenylation domain-containing protein | SAMN05421847_1122 | Not Available | Positive | 1157144 - 1158589 | 54891.3 |
| acetyltransferase (gnat) family protein | SAMN05421847_1123 | Not Available | Positive | 1158586 - 1159206 | 23850.4 |
| acyl carrier protein | SAMN05421847_1124 | Not Available | Negative | 1159199 - 1159429 | 8548.25 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05421847_1125 | Not Available | Positive | 1159478 - 1160038 | 20672.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
