Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad dependent epimerase/dehydratase family protein | SAMN05421847_1106 | Not Available | Positive | 1139936 - 1140604 | 25467.6 |
| methyltransferase domain-containing protein | SAMN05421847_1107 | Not Available | Positive | 1140676 - 1141461 | 30652.0 |
| hypothetical protein | SAMN05421847_1108 | Not Available | Positive | 1141469 - 1143067 | 63196.4 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05421847_1109 | Not Available | Positive | 1143070 - 1144869 | 68853.5 |
| glycosyl transferases group 1 | SAMN05421847_1110 | Not Available | Positive | 1144869 - 1146017 | 44888.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421847_1111 | Not Available | Positive | 1146061 - 1147005 | 36380.1 |
| hypothetical protein | SAMN05421847_1112 | Not Available | Positive | 1147002 - 1148084 | 42665.3 |
| methyltransferase, fkbm family | SAMN05421847_1113 | Not Available | Positive | 1148088 - 1148906 | 31458.5 |
| glycosyl transferase family 2 | SAMN05421847_1114 | Not Available | Positive | 1148907 - 1149845 | 36195.2 |
| hypothetical protein | SAMN05421847_1115 | Not Available | Negative | 1149842 - 1150789 | 36615.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
