Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization system protein pare | SAMN05421847_1064 | Not Available | Negative | 1100353 - 1100670 | 12715.3 |
| hypothetical protein | SAMN05421847_1065 | Not Available | Negative | 1100664 - 1100888 | 8763.35 |
| hypothetical protein | SAMN05421847_1066 | Not Available | Negative | 1100932 - 1101273 | 13600.4 |
| cysteinyl-trna synthetase | SAMN05421847_1067 | Not Available | Negative | 1101292 - 1102755 | 55371.5 |
| gtp cyclohydrolase i | SAMN05421847_1068 | Not Available | Negative | 1102850 - 1103515 | 25198.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421847_1069 | Not Available | Negative | 1103657 - 1105102 | 54469.0 |
| atp-binding cassette, subfamily b, msba | SAMN05421847_1070 | Not Available | Negative | 1105234 - 1107072 | 68794.3 |
| protein of unknown function | SAMN05421847_1071 | Not Available | Negative | 1107298 - 1107687 | 14561.5 |
| transcription termination factor rho | SAMN05421847_1072 | Not Available | Positive | 1107853 - 1109634 | 66572.9 |
| protein of unknown function | SAMN05421847_1073 | Not Available | Negative | 1109688 - 1111622 | 74304.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
