Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN05421847_1042 | Not Available | Positive | 1075645 - 1077201 | 57230.3 |
| sec-independent protein translocase protein tata | SAMN05421847_1043 | Not Available | Positive | 1077233 - 1077430 | 7206.95 |
| protein of unknown function | SAMN05421847_1044 | Not Available | Positive | 1077453 - 1078064 | 24161.5 |
| hypothetical protein | SAMN05421847_1045 | Not Available | Positive | 1078061 - 1078492 | 16236.5 |
| gtp cyclohydrolase ii | SAMN05421847_1046 | Not Available | Positive | 1078521 - 1079138 | 23046.6 |
| hypothetical protein | SAMN05421847_1047 | Not Available | Negative | 1079169 - 1079684 | 18876.2 |
| beta-glucosidase | SAMN05421847_1048 | Not Available | Positive | 1079765 - 1081504 | 65118.4 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | SAMN05421847_1050 | Not Available | Positive | 1081633 - 1082772 | 42475.6 |
| hypothetical protein | SAMN05421847_1051 | Not Available | Positive | 1082787 - 1083197 | 16641.5 |
| protein of unknown function | SAMN05421847_1053 | Not Available | Positive | 1083939 - 1085201 | 49319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
