Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein | SAMN05421847_1032 | Not Available | Negative | 1061263 - 1062372 | 41359.9 |
| rhomboid family protein | SAMN05421847_1033 | Not Available | Negative | 1062475 - 1063275 | 31065.6 |
| protein of unknown function | SAMN05421847_1034 | Not Available | Positive | 1063784 - 1064890 | 42394.4 |
| predicted zn-dependent peptidase | SAMN05421847_1035 | Not Available | Negative | 1065273 - 1068197 | 110251.0 |
| exo-beta-1,3-glucanase, gh17 family | SAMN05421847_1036 | Not Available | Negative | 1068358 - 1069599 | 46988.7 |
| protein of unknown function | SAMN05421847_1037 | Not Available | Negative | 1069738 - 1070451 | 27903.2 |
| dihydroorotase | SAMN05421847_1038 | Not Available | Negative | 1070754 - 1072091 | 50102.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421847_1039 | Not Available | Positive | 1072245 - 1073678 | 53752.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421847_1040 | Not Available | Positive | 1073739 - 1074764 | 37281.7 |
| protein of unknown function | SAMN05421847_1041 | Not Available | Positive | 1074854 - 1075648 | 30197.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
