Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421847_0090 | Not Available | Positive | 80436 - 81494 | 38586.0 |
| hypothetical protein | SAMN05421847_0091 | Not Available | Positive | 81517 - 81747 | 8912.74 |
| membrane protein yfho | SAMN05421847_0092 | Not Available | Positive | 81764 - 84325 | 96666.0 |
| hypothetical protein | SAMN05421847_0093 | Not Available | Positive | 84467 - 85135 | 25787.1 |
| hypothetical protein | SAMN05421847_0094 | Not Available | Positive | 85282 - 86568 | 49843.6 |
| abc-type multidrug transport system, atpase component | SAMN05421847_0095 | Not Available | Negative | 86784 - 87434 | 24549.3 |
| hypothetical protein | SAMN05421847_0096 | Not Available | Negative | 87431 - 87697 | 10673.2 |
| dna mismatch repair protein muts2 | SAMN05421847_0097 | Not Available | Negative | 87797 - 89950 | 82570.7 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421847_0098 | Not Available | Positive | 90015 - 90518 | 19631.5 |
| uracil-dna glycosylase | SAMN05421847_0099 | Not Available | Positive | 90647 - 91288 | 24699.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
