Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05421837_101923 | Not Available | Negative | 955172 - 956215 | 38567.2 |
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | SAMN05421837_101924 | Not Available | Negative | 956212 - 957720 | 53951.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421837_101925 | Not Available | Negative | 957717 - 958664 | 33943.6 |
| dna-binding transcriptional regulator, gntr family | SAMN05421837_101926 | Not Available | Negative | 958681 - 959349 | 24102.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05421837_101927 | Not Available | Negative | 959331 - 960752 | 49944.3 |
| aldehyde dehydrogenase (nad+) | SAMN05421837_101928 | Not Available | Negative | 960826 - 962262 | 51078.8 |
| choline dehydrogenase | SAMN05421837_101929 | Not Available | Positive | 962401 - 963831 | 50136.9 |
| acetyl esterase/lipase | SAMN05421837_101930 | Not Available | Negative | 963818 - 964657 | 30020.6 |
| predicted oxidoreductase | SAMN05421837_101931 | Not Available | Negative | 964654 - 965601 | 33289.6 |
| d-arabinose 1-dehydrogenase, zn-dependent alcohol dehydrogenase family | SAMN05421837_101932 | Not Available | Negative | 965610 - 966719 | 38177.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
