Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 115 | SAMN05421837_101913 | Not Available | Positive | 942196 - 945225 | 109821.0 |
| transcriptional regulator, laci family | SAMN05421837_101914 | Not Available | Negative | 945666 - 946727 | 37927.5 |
| endo-1,4-beta-xylanase | SAMN05421837_101915 | Not Available | Positive | 946798 - 947817 | 37876.9 |
| polysaccharide deacetylase | SAMN05421837_101916 | Not Available | Negative | 947804 - 948337 | 18668.3 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05421837_101917 | Not Available | Negative | 948402 - 949334 | 34516.9 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421837_101918 | Not Available | Negative | 949608 - 949811 | 7233.44 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421837_101919 | Not Available | Negative | 949912 - 951177 | 46302.3 |
| fad/fmn-containing dehydrogenase | SAMN05421837_101920 | Not Available | Negative | 951189 - 952571 | 52899.1 |
| hypothetical protein | SAMN05421837_101921 | Not Available | Positive | 952806 - 953318 | 17731.8 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421837_101922 | Not Available | Positive | 953342 - 955189 | 65421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
