Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family protein | SAMN05421837_101903 | Not Available | Negative | 929739 - 931547 | 66597.9 |
| dihydrofolate reductase | SAMN05421837_101904 | Not Available | Positive | 931941 - 932504 | 20106.0 |
| hypothetical protein | SAMN05421837_101905 | Not Available | Negative | 932515 - 933300 | 27879.5 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN05421837_101906 | Not Available | Negative | 933498 - 934169 | 23281.9 |
| lysophospholipase l1 | SAMN05421837_101907 | Not Available | Negative | 934407 - 935624 | 41742.4 |
| beta-glucosidase | SAMN05421837_101908 | Not Available | Negative | 935621 - 937918 | 80545.9 |
| transcriptional regulator, laci family | SAMN05421837_101909 | Not Available | Negative | 937949 - 938959 | 35215.0 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN05421837_101910 | Not Available | Positive | 939093 - 940388 | 45658.9 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN05421837_101911 | Not Available | Positive | 940385 - 941356 | 34902.6 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN05421837_101912 | Not Available | Positive | 941356 - 942180 | 29397.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
