Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-formylglutathione hydrolase frmb | SAMN05421837_101873 | Not Available | Positive | 898971 - 899984 | 36259.1 |
| short-chain dehydrogenase | SAMN05421837_101874 | Not Available | Positive | 899981 - 900811 | 29026.3 |
| udp:flavonoid glycosyltransferase yjic, ydhe family | SAMN05421837_101875 | Not Available | Positive | 901011 - 902210 | 42642.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421837_101876 | Not Available | Positive | 902215 - 902625 | 14174.9 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN05421837_101877 | Not Available | Negative | 902622 - 903617 | 35385.2 |
| catalase | SAMN05421837_101878 | Not Available | Negative | 903696 - 905207 | 57135.3 |
| dna ligase d, 3'-phosphoesterase domain-containing protein | SAMN05421837_101879 | Not Available | Positive | 905305 - 905679 | 14388.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421837_101880 | Not Available | Positive | 905669 - 906499 | 28571.6 |
| protein of unknown function | SAMN05421837_101881 | Not Available | Negative | 906484 - 907164 | 24442.9 |
| nad+ kinase | SAMN05421837_101882 | Not Available | Negative | 907335 - 908201 | 30152.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
