Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421837_101853 | Not Available | Positive | 872299 - 873795 | 52765.8 |
| anti-anti-sigma factor | SAMN05421837_101854 | Not Available | Negative | 873809 - 874189 | 13145.8 |
| dna-binding transcriptional regulator, merr family | SAMN05421837_101855 | Not Available | Positive | 874576 - 875454 | 30848.9 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN05421837_101856 | Not Available | Positive | 875783 - 879388 | 129386.0 |
| dna-binding transcriptional regulator, pucr family | SAMN05421837_101857 | Not Available | Positive | 879488 - 881116 | 57621.1 |
| cysteine desulfurase family protein, vc1184 subfamily | SAMN05421837_101858 | Not Available | Negative | 881498 - 882697 | 41184.9 |
| hypothetical protein | SAMN05421837_101859 | Not Available | Negative | 882718 - 882939 | 8054.44 |
| alpha-1,2-mannosyltransferase | SAMN05421837_101860 | Not Available | Positive | 883070 - 884299 | 43751.2 |
| protein of unknown function | SAMN05421837_101861 | Not Available | Negative | 884250 - 884669 | 14274.0 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05421837_101862 | Not Available | Positive | 884732 - 885208 | 16961.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
