Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05421837_101823 | Not Available | Positive | 839510 - 840715 | 43979.6 |
| methane oxygenase pmoa | SAMN05421837_101824 | Not Available | Positive | 840712 - 841632 | 33807.4 |
| pectate lyase | SAMN05421837_101825 | Not Available | Positive | 841644 - 842918 | 45398.9 |
| hypothetical protein | SAMN05421837_101826 | Not Available | Positive | 843070 - 843285 | 6808.13 |
| pectate lyase | SAMN05421837_101827 | Not Available | Positive | 843370 - 843852 | 17294.4 |
| pectinesterase/pectate lyase | SAMN05421837_101828 | Not Available | Positive | 843909 - 844916 | 34781.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05421837_101829 | Not Available | Positive | 844988 - 845974 | 35740.8 |
| beta-galactosidase, domain 2 | SAMN05421837_101830 | Not Available | Positive | 846253 - 849132 | 101653.0 |
| cytosine deaminase | SAMN05421837_101831 | Not Available | Negative | 849296 - 849781 | 16869.1 |
| hypothetical protein | SAMN05421837_101832 | Not Available | Negative | 850192 - 850491 | 10139.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
