Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylitol oxidase | SAMN05421837_101813 | Not Available | Positive | 828725 - 829963 | 43955.9 |
| hypothetical protein | SAMN05421837_101814 | Not Available | Positive | 830050 - 830964 | 33187.4 |
| transcriptional regulator, laci family | SAMN05421837_101815 | Not Available | Negative | 830979 - 831956 | 34133.8 |
| pectate lyase | SAMN05421837_101816 | Not Available | Positive | 832186 - 833151 | 33444.8 |
| predicted dehydrogenase | SAMN05421837_101817 | Not Available | Positive | 833355 - 834536 | 41695.9 |
| multiple sugar transport system substrate-binding protein | SAMN05421837_101818 | Not Available | Positive | 834747 - 836027 | 45582.9 |
| multiple sugar transport system permease protein | SAMN05421837_101819 | Not Available | Positive | 836028 - 837002 | 35780.8 |
| multiple sugar transport system permease protein | SAMN05421837_101820 | Not Available | Positive | 836999 - 837844 | 31272.8 |
| hypothetical protein | SAMN05421837_101821 | Not Available | Positive | 837850 - 838410 | 18894.3 |
| predicted dehydrogenase | SAMN05421837_101822 | Not Available | Positive | 838407 - 839510 | 39029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
