Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, acrr family | SAMN05421837_101803 | Not Available | Negative | 818438 - 819007 | 20106.9 |
| hypothetical protein | SAMN05421837_101804 | Not Available | Positive | 819150 - 819689 | 19072.3 |
| trypsin | SAMN05421837_101805 | Not Available | Negative | 819739 - 820440 | 23849.7 |
| dna-binding transcriptional activator of the sarp family | SAMN05421837_101806 | Not Available | Positive | 820714 - 823455 | 98030.9 |
| hypothetical protein | SAMN05421837_101807 | Not Available | Negative | 823505 - 824005 | 17154.8 |
| hypothetical protein | SAMN05421837_101808 | Not Available | Positive | 824272 - 824862 | 19438.1 |
| papain-like cysteine protease avrrpt2 | SAMN05421837_101809 | Not Available | Positive | 825067 - 825651 | 21242.4 |
| hypothetical protein | SAMN05421837_101810 | Not Available | Positive | 825648 - 826415 | 25503.0 |
| dna-binding transcriptional regulator, lrp family | SAMN05421837_101811 | Not Available | Positive | 826483 - 827514 | 37194.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421837_101812 | Not Available | Positive | 827549 - 828688 | 39952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
