Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421837_101773 | Not Available | Positive | 779602 - 779739 | 4740.04 |
| cellulose binding domain-containing protein | SAMN05421837_101774 | Not Available | Negative | 779741 - 781189 | 48709.1 |
| phospholipase c | SAMN05421837_101775 | Not Available | Negative | 781306 - 783345 | 73377.6 |
| hypothetical protein | SAMN05421837_101776 | Not Available | Positive | 783578 - 783832 | 8390.05 |
| beta-glucanase, gh16 family | SAMN05421837_101777 | Not Available | Positive | 784003 - 784845 | 30014.6 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05421837_101778 | Not Available | Positive | 785038 - 785955 | 31289.5 |
| vancomycin resistance protein vanj | SAMN05421837_101779 | Not Available | Positive | 785952 - 786902 | 33325.1 |
| transcriptional regulator, laci family | SAMN05421837_101780 | Not Available | Positive | 787131 - 788177 | 37020.9 |
| simple sugar transport system substrate-binding protein | SAMN05421837_101781 | Not Available | Positive | 788261 - 789235 | 34127.7 |
| simple sugar transport system atp-binding protein | SAMN05421837_101782 | Not Available | Positive | 789246 - 790760 | 54562.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
