Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted transcriptional regulator, arsr family | SAMN05421837_101763 | Not Available | Positive | 767908 - 768558 | 23590.1 |
| hypothetical protein | SAMN05421837_101764 | Not Available | Negative | 768561 - 769319 | 25094.3 |
| hypothetical protein | SAMN05421837_101765 | Not Available | Negative | 769360 - 770475 | 39824.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101766 | Not Available | Negative | 770468 - 771040 | 21032.1 |
| hypothetical protein | SAMN05421837_101767 | Not Available | Negative | 771037 - 771423 | 12076.0 |
| transcriptional regulator, laci family | SAMN05421837_101768 | Not Available | Positive | 771571 - 772614 | 36862.0 |
| npcbm-associated, new3 domain of alpha-galactosidase | SAMN05421837_101769 | Not Available | Positive | 772800 - 776885 | 143050.0 |
| hypothetical protein | SAMN05421837_101770 | Not Available | Negative | 776866 - 777570 | 25749.9 |
| arginine exporter protein argo | SAMN05421837_101771 | Not Available | Negative | 777682 - 778332 | 21229.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421837_101772 | Not Available | Positive | 778517 - 779311 | 27751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
