Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05421837_101734 | Not Available | Positive | 734998 - 736089 | 37381.0 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05421837_101735 | Not Available | Positive | 736178 - 738277 | 75882.7 |
| nitroreductase | SAMN05421837_101736 | Not Available | Negative | 738282 - 738944 | 24370.4 |
| hypothetical protein | SAMN05421837_101737 | Not Available | Positive | 739166 - 739585 | 15903.4 |
| fe-s oxidoreductase | SAMN05421837_101738 | Not Available | Positive | 739617 - 741716 | 77272.3 |
| inner membrane component of t3ss domain-containing protein | SAMN05421837_101739 | Not Available | Positive | 741793 - 742365 | 20001.0 |
| na+/melibiose symporter | SAMN05421837_101740 | Not Available | Negative | 742327 - 743646 | 46162.0 |
| transcriptional regulator, tetr family | SAMN05421837_101741 | Not Available | Negative | 743762 - 744403 | 24149.8 |
| shikimate dehydrogenase | SAMN05421837_101742 | Not Available | Positive | 744518 - 745366 | 29496.5 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05421837_101743 | Not Available | Positive | 745356 - 747170 | 64653.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
