Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple sugar transport system permease protein | SAMN05421837_1015 | Not Available | Negative | 3170 - 4075 | 33309.9 |
| multiple sugar transport system substrate-binding protein | SAMN05421837_1016 | Not Available | Negative | 4072 - 5400 | 46670.2 |
| protein of unknown function | SAMN05421837_1017 | Not Available | Negative | 5464 - 6240 | 27127.5 |
| hypothetical protein | SAMN05421837_1018 | Not Available | Positive | 6478 - 7389 | 35899.1 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421837_1019 | Not Available | Negative | 7784 - 8782 | 34912.9 |
| hypothetical protein | SAMN05421837_10110 | Not Available | Positive | 8977 - 9912 | 33135.1 |
| hypothetical protein | SAMN05421837_10111 | Not Available | Negative | 10059 - 10529 | 15808.8 |
| hypothetical protein | SAMN05421837_10112 | Not Available | Positive | 10918 - 11019 | 3815.62 |
| myxo-cterm domain-containing protein | SAMN05421837_10113 | Not Available | Negative | 11782 - 12156 | 12147.3 |
| hypothetical protein | SAMN05421837_10114 | Not Available | Positive | 12410 - 12751 | 12457.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
