Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05421837_101614 | Not Available | Positive | 611662 - 612621 | 34083.8 |
| peptide/nickel transport system permease protein | SAMN05421837_101615 | Not Available | Positive | 612618 - 614522 | 67355.1 |
| oligopeptide/dipeptide abc transporter, atp-binding protein, c-terminal domain-containing protein | SAMN05421837_101616 | Not Available | Positive | 614519 - 615463 | 33426.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421837_101617 | Not Available | Positive | 615463 - 616386 | 32595.5 |
| beta-galactosidase | SAMN05421837_101618 | Not Available | Positive | 616386 - 618347 | 71966.1 |
| sialidase-1 | SAMN05421837_101619 | Not Available | Positive | 618344 - 620176 | 65953.8 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN05421837_101620 | Not Available | Positive | 620184 - 622070 | 68616.7 |
| serine/threonine protein kinase | SAMN05421837_101621 | Not Available | Negative | 622075 - 623433 | 47539.5 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN05421837_101622 | Not Available | Negative | 623549 - 624010 | 17164.9 |
| polyhydroxybutyrate depolymerase | SAMN05421837_101623 | Not Available | Negative | 624073 - 625014 | 33036.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
