Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421837_101594 | Not Available | Positive | 593339 - 593602 | 9057.69 |
| hypothetical protein | SAMN05421837_101595 | Not Available | Positive | 593599 - 593997 | 13936.3 |
| espg family protein | SAMN05421837_101596 | Not Available | Negative | 594014 - 594787 | 26818.6 |
| helix-turn-helix domain-containing protein | SAMN05421837_101597 | Not Available | Positive | 594827 - 595621 | 28466.7 |
| hypothetical protein | SAMN05421837_101598 | Not Available | Negative | 595533 - 596126 | 20172.1 |
| hypothetical protein | SAMN05421837_101599 | Not Available | Negative | 596123 - 596806 | 23709.7 |
| excreted virulence factor espc, type vii esx diderm | SAMN05421837_101600 | Not Available | Negative | 597169 - 597456 | 9628.01 |
| ppe family protein | SAMN05421837_101601 | Not Available | Negative | 597453 - 598631 | 41214.6 |
| hypothetical protein | SAMN05421837_101602 | Not Available | Negative | 598624 - 599031 | 14627.1 |
| hypothetical protein | SAMN05421837_101603 | Not Available | Positive | 599157 - 599702 | 18074.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
