Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis pretoriensis |
| Strain | strain DSM 44654 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1487983 bp
Thymine Count
1480820 bp
Guanine Count
3655551 bp
Cytosine Count
3674672 bp
Genome Length
10299026 bp
Protein-coding Genes
9764 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemoglobin | SAMN05421837_101564 | Not Available | Negative | 566125 - 566580 | 16565.5 |
| thioredoxin reductase | SAMN05421837_101565 | Not Available | Negative | 566622 - 567560 | 33046.1 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421837_101566 | Not Available | Positive | 567638 - 568222 | 21346.9 |
| uncharacterised acr, ykgg family cog1556 | SAMN05421837_101567 | Not Available | Negative | 568219 - 568830 | 21223.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101568 | Not Available | Positive | 568951 - 569820 | 31671.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421837_101569 | Not Available | Negative | 569817 - 570806 | 36425.5 |
| phosphinothricin acetyltransferase | SAMN05421837_101570 | Not Available | Negative | 570827 - 571312 | 17475.8 |
| helix-turn-helix domain-containing protein | SAMN05421837_101571 | Not Available | Positive | 571331 - 571915 | 20727.7 |
| polygalacturonase | SAMN05421837_101572 | Not Available | Positive | 571992 - 573542 | 54864.8 |
| hypothetical protein | SAMN05421837_101573 | Not Available | Negative | 573898 - 574116 | 7452.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
